AI-Driven 3D Tissue Imaging Across Research Fields

Multi field 3D tissue imaging capabilities across research areas

Aurora 3D Platform enables AI-powered 3D tissue imaging across multiple research fields. The same platform and 3D histology imaging workflows can be applied to dermatology, lung, gastrointestinal, immuno-oncology, and vascular biology. This page summarizes example indications, tissue inputs, and quantitative analytics for each field, showing how one 3D tissue imaging platform supports diverse programs.

You can adapt panels, markers, and analysis pipelines to new indications while preserving a consistent 3D workflow.

Alpenglow Biosciences applies 3D tissue imaging and AI-powered analysis to inflammatory and immune-mediated skin diseases, focusing on nerve-immune interactions and skin architecture.

3D Tissue Imaging of Atopic Dermatitis Skin Punch Biopsy staining nerves, immune cells and nuclei.

Indications

Atopic dermatitis (AD)

Alopecia Areata (AA)

Hidradenitis Suppurativa (HS)

Chronic Spontaneous Urticaria (CSU)

Tissue Inputs

FFPE Skin Punch Biopsies

Freshly Fixed Tissues

Fresh, fixed or frozen skin samples

Analytics (examples)

CD45Ro Deep Tissue Staining

The multi-field capabilities of Aurora 3D include immuno-oncology profiling across solid tumors, complementing the dedicated 3D immuno-oncology assays.

Indications

Colon Tumors

Lung Tumors

Skin Tumors

Pancreas Tumors

Tissue Inputs

Tumor Biopsies

Resected Tumor Material

Fresh, Frozen, or FFPE tumor samples

Analytics (examples)

TIL tumor/TIL stroma ratio

TLS count and volume

% tumor or tumor volume

Immune cell phenotypes and spatial distribution

3D gastrointestinal tissue imaging

3D gastrointestinal imaging captures villi, crypts, mucosal architecture, and innervation in a single volume, supporting studies in intestinal disease.

Ileum in 3D

Indications

Celiac Disease

Irritable Bowel Disease

Ulcerative Colitis

Hirschsprung’s Disease

Tissue Inputs

Large resected gastrointestinal specimens

Colonoscopy or endoscopy biopsies

Fresh, frozen, or FFPE GI tissues

Analytics (examples)

Villus height to crypt depth ratios

Mucosal thickness and architecture

Innervation patterns in the intestinal wall

3D lung tissue imaging

3D lung imaging reveals fibrosis patterns, airway structure, and immune infiltration across the full tissue volume, which can be difficult to appreciate in 2D.

Lung IPF in 3D

Indications

Idiopathic Pulmonary Fibrosis (IPF)

Chronic Obstructive Pulmonary Disease (COPD)

Tissue Inputs

Lung Bronchial Biopsies

Resected Material

Fresh, Frozen or FFPE

Analytics (examples)

3D vascular and angiogenesis imaging

Mouse Fat Pat in 3D

3D imaging of vasculature captures vessels, branching patterns, and relationships to surrounding tissue, enabling quantitative vascular analysis.

Indications

Tissue Inputs

Tissue-Specific Biopsies

Resected heart, tumor, or placental tissue

Fresh, Frozen or FFPE samples

Analytics (examples)

Cell count within and around vessels

Vessel dimensions, for example, diameter and length

Distance Measurements between vessels and other structures

Branching Patterns and Vascular Network Complexity

Explore more 3D tissue imaging use cases

Multi-field 3D tissue imaging capabilities extend beyond the examples listed above. Aurora 3D and Alpenglow’s 3D histology imaging services can be adapted to additional organs, disease areas, and models.

3D Use cases
3D Imaging Videos
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