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3D spatial biology platform

Turn intact tissue into quantitative 3D data

Aurora 3D™ combines open-top light-sheet microscopy, automated volumetric data processing, and AI analysis to measure cells, structures, and spatial relationships across intact tissue.

Trusted by leading research teams and eight of the top 10 pharmaceutical companies

Intact tissue imaging

High-resolution 3D data

AI-powered quantitative analysis

End-to-end spatial biology

How to work with Alpenglow

Choose how to access the 3D imaging workflow

Outsourced 3D histology

Complete workflow performed by Alpenglow

Send tissue for end-to-end 3D analysis

Ship your fixed tissue samples directly to our laboratories. Our team executes the complete pipeline: tissue clearing, staining, high-throughput 3D light-sheet imaging, and quantitative AI data extraction.

How it works

Your team defines the biological question and sends the samples. Our team performs the preparation, imaging, processing, and analysis workflow.

In-house 3D imaging platform

Instrument operated within your facility

Install the imaging workflow in your facility

Bring hybrid open-top light-sheet microscopy directly into your laboratory. Scale internal discovery with an open, multi-immersion architecture built for diverse sample formats and terabyte-scale data management.

How it works

Alpenglow supplies the microscope and connected software options. Your team operates the workflow within your laboratory or shared facility.

Applications

Where full-volume imaging changes the biological readout

3D tissue imaging example showing intact skin architecture in alopecia research

Dermatology

Map skin biology across whole biopsies

Follow long nerve fibers, immune clusters, follicles, vessels, and epidermal architecture through intact skin biopsies instead of interpreting isolated tissue planes.

Quantify

Nerve density, immune distribution, follicular organization, spatial distances, and regional variation.

Explore dermatology
3D tissue imaging example for immuno-oncology research

Immuno-oncology

Quantify immune organization across intact tumors

Resolve immune infiltration, exclusion zones, tumor boundaries, collagen, vasculature, and tertiary lymphoid structures across tissue depth.

Quantify

Cell density, infiltration depth, clustering, TLS volume, spatial relationships, and tissue heterogeneity.

Explore immuno-oncology
Three-dimensional imaging of ileum tissue architecture
Three-dimensional imaging of fibrotic lung tissue architecture
Whole-heart 3D tissue imaging

Multi-field capabilities

Analyze connected structures across tissues

Trace villi, crypts, vessels, nerves, airways, ducts, lesions, and other connected structures across organs and model systems.

Quantify

Branching, diameter, volume, morphology, density, structural continuity, and regional distribution.

Explore multi-field applications

Aurora 3D™ Spatial Biology Solution

Capture intact tissue. Turn the volume into quantitative data.

Imaging hardware

Acquisition
Alpenglow 3Di Hybrid Open-Top Light-Sheet microscope

3Di

Hybrid Open-Top Light-Sheet microscope

Image intact tissue

Capture whole-sample context and selected high-resolution regions of interest with a dual-path Scout-to-Zoom imaging workflow.

Explore

Data and analysis software

Processing and quantification
3Dm volumetric data management interface displaying a multichannel 3D tissue dataset

3Dm

Volumetric data management

Process the volume

Stitch, align, correct, register, and organize multichannel 3D datasets for review and downstream analysis.

Explore
3Dai image analysis interface displaying segmented tissue and quantitative spatial outputs

3Dai

AI-powered image analysis

Quantify the biology

Segment cells and structures, measure spatial relationships, and generate quantitative outputs across intact tissue volumes.

Explore

Multimodal tissue intelligence

Summit AI

Turn full-sample tissue data into earlier, higher-confidence development decisions

Summit AI™ analyzes full-sample 3D imaging and connects multimodal data to generate quantitative tissue signatures and spatial profiles. These insights help teams identify treatment effects earlier, reduce development risk, and make stronger clinical and competitive decisions.

About Alpenglow

Building the tools and partnerships advancing 3D spatial biology

Alpenglow Biosciences develops integrated 3D tissue imaging and AI-powered analysis solutions for research, drug development, and diagnostic innovation.

Latest from Alpenglow

Where to meet us and company updates

Upcoming scientific events, partnerships, platform developments, and announcements from Alpenglow Biosciences.

Your next step

Bring your tissue question into 3D

Share your sample type, markers, and study goals. Alpenglow can help determine whether imaging services, an in-house Aurora 3D™ workflow, or quantitative analysis is the right path for your team.

Intact tissue imaging

3D imaging of intact heart tissue showing vascular structures

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